News

 

Welcome

The SED-ML Web tools represent a suite of tools for creating, editing, simulating and validating SED-ML files.

Create

Create a SED-ML document for an SBML model using a simple wizard.

Edit

Create/Edit a SED-ML document either through SED-ML script, or by directly manipulating the XML.

Upload a SED-ML Document

The Simulation Experiment Description Markup Language or SED-ML is a new standard that helps to encode the simulation experiments that we perform on computational models. For samples of SED-ML files to use on this site, please consult the LibSedML sources . For more information about SED-ML please consult the project web site .

This version of the SED-ML Web tools have been updated to simulate the Repeated Tasks of SED-ML L1V2. If you like to try the examples directly, try one of the links below:

What is Systems Biology Markup Language?

The Systems Biology Markup Language or SBML is a markup language for encoding computational models in Systems Biology. It allows to encode metabolic, gene-regulatory, signalling models as well as purely mathematical models. Since the recent release of SBML Level 3 this language is now extensible which allows to capture new modeling paradigms as well.